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The 1st STTM Technology Workshop: Modulating plant microRNAs using Short Tandem Target Mimic (STTM)

Institution: Michigan Technological University
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Why This Project Is Important 

Short Tandem Target Mimic (STTM) has been demonstrated to effectively inactivate microRNAs in plants (1-13). Supported by the NSF-PGRP program, a 10-day workshop will be offered to introduce the STTM technology and provide training on using this technology to study the function of specific microRNA in plants. During the workshop, students will learn the construction of STTM and examine the transgenic STTM plants mainly in Arabidopsis and other available crops. The workshop is composed of demonstration experiments and lectures given by the principal investigators. Trainees will learn key miRNA technology for their future career development such as going for graduate studies and developing small business biotech companies.

Project Description 

Small RNAs, including microRNAs (miRNAs) and small interfering RNAs (siRNAs), play central roles in growth and development, epigenetics, genome integrity, defense against pathogen infection, and responses to environmental changes in plants. miRNAs are especially important in controlling plant development, productivity, and responses to biotic and abiotic stresses by negatively regulating gene expression at the post-transcriptional level. Hundreds to thousands of miRNAs have been identified from dozens of plant species. However, their roles in plant development and response against various pathogens and other stresses are largely unknown. This project will integrate the most recent cutting-edge genomics technology into the study of miRNAs in crop plants. Students at all levels of education will be engaged in a variety of activities including teaching, training, learning workshops, and technology-extension. The project will provide research training in small tandem target mimic (STTM) technology, rice transformation, and functional studies of miRNAs for postdoctoral associates, graduate and undergraduate students. Underrepresented minorities and women, as well as students from the Upper Peninsula region of Great Lakes, will be targeted and recruited. The project will also organize and hold a training workshop in STTM construction. The knowledge provided by this project will be disseminated to the public at large through informal talks at appropriate community venues.

This work will address key mechanistic hypotheses regarding miRNA evolution by answering important questions:

  • Why do plants need so many miRNAs?
  • Are they essential?
  • What are their functional conservation and diversification in different plant lineages?

This project will develop miRNA "knockdown" populations in selected agriculturally important crops as a pilot project using the recently developed STTM technology. These mutant populations will be further used to investigate the functional conservation and diversification of six highly conserved families of plant miRNAs, and to study the regulatory role of miRNAs in plant-microbe interactions. The project will provide a resource database, application and service for web-based materials transfer and distribution. All sequence data will be deposited at Gene Expression Omnibus (GEO). STTM constructs, STTM seeds of rice, maize, Arabidopsis and soybean for use in basic biology in plant science and crop improvement will be available upon request. Trainees can be graduates, undergraduates, visiting scholars in the US and around the world. We will select 10 trainees geographically and support them to join in the workshop with a full travel and lodging coverage.

To organize the workshop, the selected trainees will need to register the workshop ($1,000 registration fee) online through this website.

How to apply:

Please send email to gtang1@mtu.edu. In the email, please include your CV, statement of research interest, and letter support of your mentor or supervisor.

Time and location:

The training workshop will start on December 15, 2017 and will last to December 25, 2017 at Michigan Tech University.

Contact information:

Guiliang Tang, Ph.D. and Professor Department of Biological Sciences, Michigan Technological University Dow Environmental Sciences and Engineering Building - Room 406 1400 Townsend Drive Houghton, MI 49931-1295 Phone: 906-487-2174 (Office); 906-281-8710 (Cell). Email: gtang1@mtu.edu

Meet the Researcher

Guiliang Tang

Dr. Tang conducted his graduate research on the catabolic pathway of the essential amino acid lysine in the laboratory of Dr. Gad Galili at the Weizmann Institute of Sciences, Israel. He then moved to the laboratory of Dr. Phillip D. Zamore at the University of Massachusetts Medical School for his post-doctoral research on plant RNA interference (RNAi) and microRNA (miRNA) pathways. He established his independent Gene Suppression Laboratory at the University of Kentucky (UK) and became a tenured Associate Professor there. In October 2011, he moved from UK to Michigan Technological University (MTU) at the Michigan’s Upper Peninsula (U. P.) for a family reunion and enjoyed the first winter time with much outdoor activities with his wife and kids. In May 2016, he became a full professor.



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$4,000
of $10,000 fund goal
The average donation for this project is $1000
33
days left
40%
funded
$1,000
last

What Your Donation Can Help Us Do: 

  • Training students, post-docs, and visiting scholars.
Although there are no rewards for this project, all donors will receive an email receipt with tax-deduction information.
NSF will support this workshop with a budget $48,171.72. Registration fee: $1,000/student; 10 trainee will be selected for joining this workshop. Trainee's travel and lodging will be covered.

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